YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167265, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTALITGF TGQVGSQMAD FLLANTDYEV IGMMRWQEPM DNIYHLSDRI NKKDRISIFY  60
   61 ADLNDYSSLQ KLFESQRPDV IFHLAAQSYP KTSFDIPIET LQTNIIGTAN ILENIRILKA 120
  121 KDGYDPVVHV CSSSEVYGRA KVGIKLNEDT TFHGASPYSI SKIGTDYLGR FYGEAYNIRT 180
  181 FVTRMGTHSG PRRSDVFFES TVAKQIALIE TGYQEPVIKV GNLSSVRTFQ DARDAIRAYY 240
  241 LLSLESQKGK VPCGEAFNIA GEEAFKLPEV IEILLSFSTR KDIKIEQDEE RLRPIDADYQ 300
  301 MFDNTKIKSF INWKPEIAAR KMFEDLLNHW RDEIKKGRIP LNR

Type	Start	End	Confidence
Signal Peptide	1	16	0.84
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	343	0.99