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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57167431, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPNKKFYKL FKLSLFALLL ITNLNAQESN EAINLQKVVV SATGFEQDAD SNLRNVISIE  60
   61 GKDLQNKGYV SLEQALERIS GISFVNFGLG RNIDMRGQGN KSNIAVKVMI DGRAINVLDN 120
  121 SHGVTPLNSI NLDNVERIEI IPGGGSVLYG NGTRGGVINI ITKKQKSDAF AINLKSSTYN 180
  181 HGGLGGNLGI NGAKQINENL AFSFDIQSFN LDGYQKGYNE KGYFINTKTY IDINDNSDLT 240
  241 LGYNYFKSKN TSSGYLTKTQ AQSNPTQKGN SDNITQINRP EISLDYHYYF DDIWEFNLEA 300
  301 FWQNQKINYL KDVSTMSYRG MSLPVYQNGS GFEDTLTGIS LKNKLNYANN SYFIFGYEFA 360
  361 NHDAKRKSLV YYSAAPIINY HRMTTLMDMT KQSHSIFALN SHNFNEFFTL SGGARYEFST 420
  421 YNTNRSYRNE MSMNGRPPSS NPMITDSTTL FDTDKNTNNF AFEITPNFKY SDTGNLYLKY 480
  481 ERGFVSPTPA QFVNRNNNTS NGIPPYYSSN LKAEIFDTFE LGIDDFWWDF YGFNLTLFYT 540
  541 LSKDEISYLG NPHSTSGSWW KYYNIDQTRR LGVELSLSQN FLDDDLIFRE SLTYLDAKIS 600
  601 KGVNDGMRIP YVSKIKATAG LEYAWNKNFS NFVDLTYFSR AKDGGTINEN TGKMSKNSWI 660
  661 RDYFLTDIGM KYNYKKLQIL AGIRNLFDKR YYTYQDSIND QYLVGNGRNY YVEFKYAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle