YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680722, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSAFCAIS SAALADGGQT KLPLLELPGI EDRDYWVPGE VNVEGKLEAM QAVVGAKAVP  60
   61 FAGTQAEPIQ IAMIYPSADT SDFWARNYIA MTKRLEELGI QFETTEFASR QIEHSLQSTY 120
  121 ANQVVQDADL YDFVIFGPSE LAIQADNIDK MAASEGFSTF VWAFHTPLKD LKNQPDGWFD 180
  181 FSSAAGALTM CDYMLGRLGN DVTMAMNRGI PGITDDQRSG DFKACVEEKG NWTTIYEHYG 240
  241 EYQREGGFEG TSLILQAYPE ATVIHNANTA MAMGSVEAQI SVGKEKEVFS TGWGGTGLEL 300
  301 DAIRRGELDA TPMRMGDDVG AATAEAIKAH LEGRSDELPF VFLGRITVAH DQMSAEEIDA 360
  361 LEAEAFRFSG VGALER

Type	Start	End	Confidence
Signal Peptide	1	15	0.98
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	376	0.99