YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|162139593
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEGHLLFS IASAVFAKNA ELTPVLAHGD WWHIIPSAIL TCLLPDIDHP KSFLGQRLKW  60
   61 VSKPIARAFG HRGFTHSLLA VFALLATFYL KVPDTWIIPA DALQGMVLGY LSHIVADMLT 120
  121 PAGVPLLWPC RWRFRLPILA PRKGNQLERF LCMALFAWAV WMPQSMPENN VIRWSSQMIT 180
  181 ILQMQFNRFI NHQID

Type	Start	End	Confidence
Cytoplasmic	1	68	0.70
Transmembrane Helix	69	90	0.90
Non-Cytoplasmic	91	108	0.88
Transmembrane Helix	109	130	0.90
Cytoplasmic	131	146	0.92
Transmembrane Helix	147	165	0.82
Non-Cytoplasmic	166	195	0.81