YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67004429, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDINNISD SLEIVTQDHL SIFSLISSSD IIGKSVMLML LIASIWSWAI ILDKIFKLAQ  60
   61 VQRRMKNFEN VFWSGGVLEQ LYESIKRSVN NPLALIFVSA MDECKSLNTK GLSDALKNNH 120
  121 KERITGAMYL AQNREVEKLE KNLSFLATVG SSAPFVGLFG TVWGIMHSFQ SIATSKNTSL 180
  181 AVVAPGIAEA LLATAIGLFA AIPAVIFYNY LISRITLINN KIEDFSSELN SILSKAIDQE 240
  241 KM

Type	Start	End	Confidence
Non-Cytoplasmic	1	30	0.93
Transmembrane Helix	31	56	0.79
Cytoplasmic	57	142	0.98
Transmembrane Helix	143	165	0.91
Non-Cytoplasmic	166	189	0.85
Transmembrane Helix	190	212	0.91
Cytoplasmic	213	242	0.98