YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58201024
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMAATLTS SLTKSSFLDT KSSIYGSPLS SRATIQRVKS SPQNLSVTMS AATPAYDLDN  60
   61 LTFAPIKESI VSREMTRRYM MDMITYADTD VVVVGAGSAG LSCAYELSKN PNINIAIIEQ 120
  121 SVSPGGGAWL GSQLFSAMVV RKPAPKFLDE LEIAYDEQDD YVVIKHAALF TSTIMSKLLA 180
  181 RPNVKLFNAV AAEDLIVKGG RVAGVVTNWA LVSMNHDTQS CMDPNVMESK IVVSSCGHDG 240
  241 PFGATGVKRL RSIGMIDSVP GMKALDMNTA EDAIVRLARE IVPGMIVTGM EVAEIDGSPR 300
  301 MGPTFGAMMI SGQKAAHLAL KALGQPNALD DSYDGLKAEE FVLAAADAGD IVDA

Type	Start	End	Confidence
Signal Peptide	1	18	0.52
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	354	0.97