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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58293963
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFNMHS RTVAIVMTTA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTGLE LQLSYTLRQQ NPVGYTVPIH LPVVNQVFSS NCAVKISPNS PVARLRQLAG 240
  241 KHIPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNIAL DLARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLINDVL DLSRLEDGSL QLDIATFNLH 420
  421 SIFREVHNLI KPVASVKKLS VALNIATDLP VYAIGDEKRL MQIILNVVGN AVKFSKEGSI 480
  481 SITAYVAKSE SLRDFRAPDF FPVQSDNHFY LRVQVKDSGL GINPQDIPNL FTKFAQTQTS 540
  541 ASQNSGGSGL GLAICKRFVN LMEGHIWIES EGLGKGCTAT FIVKLGFPER SNEFKQPFAP 600
  601 KLQANHVQTN FPGLKVLVMD DNGVSRSVTK GLLVHLGCDV TTVSNLDEFL HVISQEHKVV 660
  661 FVDVCMPGID GYELAVRIHE KFAKRHERPV LVALTGSIXK MXKENCMRVG MDGVILKPVS 720
  721 VDKMRSVXSE LLEHRVLXEA M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle