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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62734668, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPRHAAA ATPPPPRHAA AATAPQCHAA AAVATPPRQP PPRCRHTAVN ERERERSNER  60
   61 ERERTRQHLM ADRDEEQILY DTIAEGSSQY WNEEEGNEDP NQYLNEEGNV ERDAEGNQQG 120
  121 HVERDVEGNQ EEEASGSQPS VGQKRARGQR GAAKKLEGRH IITEVEEDGR PSAPAEAAKN 180
  181 YVRHSGWVVR DNVPVSTVYW RRTRARGDHE SFVPDSEKEM LWTTMLETFT LPVGTEDKLR 240
  241 DHWDEFVAYK TGEQGKAMME RNKENAAKKK YHHHLGSGGY SVAMPKWEQM EASLIERGIE 300
  301 PATANWPQRS KFWYYAHGGT LNPADGSLVF GYQIQEAARR LTDAVEASSQ GTFRPDRDRD 360
  361 ELTLALQTPE HPGRTRGKGV IPWKIGFKED IHTYRSRMRS KRDTEAKIAD LEFRVSSYEL 420
  421 NMQEEVARKV DERMAAHRSH DPQPTIPPAM VSPSGNRSSC ASTGQVGSQS MDAMQTQDES 480
  481 TCPVDDITQR TPCELHIPLK NLSIKVASGM AIPTDPSGTY HCRPIPAGYS KVEVELVEGA 540
  541 YEDLELDYPG GDGETHLRDT CHAIILWRRR YIILPGRQAA SRAPSPPQDP APSPPHAPPA 600
  601 PSPPQAPAST PQDPAPTPPR APTPTPPQAP LPAPSKSRAP PAPPLAHTRA TKKAKVDAAK 660
  661 NKDPGGMSAS VKESIKLSHY ERTLKKASSG KSKPVPQLGE QPNQEIEPLV TGKEMTIEQF 720
  721 ITDTGLTTDQ LLGVAPIEKA EVKYMYELGK PLVKPELLQS LPTQMYKFHQ LYMEMSATGR 780
  781 EMIGARIRDT DFLQGDDILW INFRGIYELY QLDALDVSIM SCWILMEIQR ARRRRVFDTG 840
  841 FIDPRKVNVA MLDQYPQETE DNLVHLLKAQ HYKTFILLPY NTEFHWVLLL IDLEACTVNV 900
  901 YDSMDKKEST FDKVFELIDR AWYRFRHLVR GKWRERLRRK FKFPCAKQKQ GTNLCGYYVC 960
  961 EYCHCLADQI ITTRELDFIR MRDNLTTHKE FIAAVQEQLM GFINEEILDP KGEFYYDGNT1020
 1021 IHRSLASELA ASTTTSKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle