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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59480077, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCVECYMMRC VTICFNYEIY VSKPWLARFV LLFPHISPIK IIRSRRIMHL TLKTKLVLTS  60
   61 LALIVLTIVS LGTFSYQTMK TQAWDAIQSE SGNTAKAYSL GIGDWFKGRQ DAIVAMKEAI 120
  121 ERDPNLDMVA HLKQTFTSGG FGLSYYGDEN AVMQRQDPSL NKAGYDPRTR GWYKETLAAN 180
  181 KGITTKPYVS HTMQALVVTL TEPVRENGRI VGVTASNLAL GALIDDVLDI PVPGNGYAML 240
  241 LDVSNKIVVA HPNEKMALKP ISELGNGFDA NNLSNEIASD GFFFTEENGK EKAVMITAVP 300
  301 NTNWAITLVM DKETLEAPLN SMLFELLSIG VLILLFVSMF TGWLVTRQLR ELGTVSDALA 360
  361 DIANGEGDLT VRINVKSDDE VGKLADNFNQ FVSRLHAMAS NLREITFELN RSAAESADSA 420
  421 VQRSQNIRHQ QDEITMVATA VTEMASATQE IAGNAENTAK SAEQAVGLTQ TGHDQANQSQ 480
  481 ASIGNLAREV NSAVGIIEDL NGHALKISSI LATIRSIAEQ TNLLALNAAI EAARAGEQGR 540
  541 GFAVVADEVR VLSQRTHTST EEIQAMIETL QSTTQEAVSV MSDSHHLAET SVKDVDEAGV 600
  601 SIGNIAAQIN VISDMATQIA SAAEEQSSVT AEISRNTEGV QEVANQMAHE AETAALQAES 660
  661 LKSLADSLEE EIKRYKL

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