YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59712217, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSVIGALA IISSVVAAPT LAKETISAVG SSSVTPLMEV FSETYMKDHS NVFIEVQGPG  60
   61 SSAGVKAAKN GSADLGMSSR NLKSDEKDPT LKELIVAHDG IAVVVNPNNK LKGLTSEQVT 120
  121 AIYKGEVKNW KEVGGADKPV VVITRDTASG TRGAFEDIMN LKKKVSGMKV SAISQRAQVA 180
  181 NGNGALKTMV ASNPYAIGYI SLGTVDSSVH ALAIDNVEPS VADIKNGTYK VSRPFLVLYK 240
  241 EGKPSAEAQK FLDWMTAETA QNLVEKKGYI SVN

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	273	0.99