YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_VIBFM
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPGEALTQ SGYIEHHLTN LSLAKLGLVA DEASFWNVHI DSLFFSVFTG MLFLWVFRSV  60
   61 AKKATTGVPG KLQCFVEMIV EFVADNVKET FHGRNPLIAP LALTIFCWVI LMNLMDLVPI 120
  121 DFLPYPAEHW LGIPYLKVVP SADVNITMAM ALGVFALMIY YSIKVKGLGG FAKELALHPF 180
  181 NHPIMIPFNL LLEVISLLAK PLSLGMRLFG NMFAGEVVFI LIAAMLPWYL QWVGALPWAI 240
  241 FHILVILIQA FVFMMLTIVY LSMAHEDSDH

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.82
Transmembrane Helix	38	57	0.89
Cytoplasmic	58	96	0.88
Transmembrane Helix	97	120	0.84
Non-Cytoplasmic	121	140	0.82
Transmembrane Helix	141	163	0.87
Cytoplasmic	164	207	0.69
Transmembrane Helix	208	230	0.88
Non-Cytoplasmic	231	237	0.60
Transmembrane Helix	238	261	0.91
Cytoplasmic	262	270	0.63