YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56972416
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCSPLVPFLS LLLLLFLPEV PRAATASLPQ GSSEGAATCK AHDLCLFGPR RLLSAPPVNV  60
   61 SLYYESLCGA CRYFLVRNLF PTWLMVMEIM NITLVPYGNA QERNVSGTWE FTCQHGELEC 120
  121 KLNKVEACLL DKLEKEAAFL TIVCMEEMED MEKKLGPCLQ LYVPEVSPES IMECATGKRG 180
  181 TELMHENAQL TDALQPPHEY VPWVLVNEKP LTDPSQLLSS VCELYQGTEK PDICSSMADA 240
  241 PREVCYK

Type	Start	End	Confidence
Signal Peptide	1	26	0.52
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	247	0.97