YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60499110
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHSQCLVTI YALAVLLGLR IEQGASQHYL HIRPAPSDNL PLVDLIEHPD PIFDPKEKDL  60
   61 NETLLRSLMG GHFDPNFMAV SLPEDRLGVD DLGELDLLLR QRPSGAMPSD IKGLEFYEGL 120
  121 QPGKKHRLTK KLRRKLQMWL WSQTFCPVLY TWTDLGSRFW PRYVKVGSCY SKRSCSVPEG 180
  181 MVCKPAKSVH LTILRWRCQR RGGQRCTWIP IQYPIISECK CSC

Type	Start	End	Confidence
Signal Peptide	1	24	0.62
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	223	0.93