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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187950829, gi...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAAASRASR AAGEGSGSAP GGSPLPRRPG PGQLAVSEWP AAPVSAPPAV APGRASGRPL  60
   61 RRRWAAMLLF GLLVAGVADG CDLVPRHLRG RRASGSAGAA ASPSAAAAGE RQALLTDPCM 120
  121 SLSPPCFTEE DRFSLEALQT IHKQMDDDKD GGIEVDESDE FIREDMKYKD ATNKHSHLHR 180
  181 EDKHITVEDL WKQWKTSEVH NWTLEDTLQW LIEFVELPQY EKNFRDNNVK GTTLPRIAVH 240
  241 ETSFMISQLK ISDRSHRQKL QLKALDVVLF GPLTRPPHNW MKDFILTISI VIGVGGCWFA 300
  301 YTQNKTSKEH VAKMMKDLES LQTAEQSLMD LQERLEKAQE ENRTVAVEKQ NLERKMMDEI 360
  361 NYAKEEACRL RELREGAECE LSRRQYAEQE LEQVRMALKK AEKEFELRSS WSVPDALQKW 420
  421 LQLTHEVEVQ YYNIKRQNAE MQLAIAKDEA EKIKKKRSTV FGTLHVAHSS SLDEVDHKIL 480
  481 EAKKALSELT TCLRERLFRW QQIEKICGFQ IAHNSGLPSL TSSLYSDHSW VVMPRVSIPP 540
  541 YPIAGGVDDL DEDTPPIVPQ FPGTVAKPAG SLARSSSLCR SRRSIVPSSP QSQRAQLPAH 600
  601 APLAAHPRHP HHPQHPQHSL PSPDPDILSV SSCPALYRNE EEEEAIYFTA EKQWEVPDTA 660
  661 SECDSLNSSS GRKPSPPSSL EMYQTLSSRK ISRDELSLED SSRGESPVTA DVSRGSPECV 720
  721 GLTETKSMIF SPASRVYNGI LEKSCSMHQL SSGIPVPHPR HTSCSSAGND SKPVQEASNV 780
  781 SRVSSIPHDL CHNGEKSKKP SKIKSLFKKK SK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle