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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60677877
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSALKSAF YKNQAPISEQ NRSQIVSRMS LLRTILLIII SIHFKLAHAD QVVLLDTTRE  60
   61 ATLEWTRYPY GPQAQTPGWV EESFTDFVKG INWRSYVVCD VAYHNVNNWL WSPFIDRGSA 120
  121 NRLYIEIQFT IRDCSLFPGN ALSCKETFSL LFYEFDAATR EPPPWQTDSY RLIARIAAGE 180
  181 GRFNQNSDVD INTEVKSIAV NKKGVYFAFR DQGACISVLA VKVYYITCPA VTENFAHFNE 240
  241 TPTGREITII EKQNGTCVDN AEPYETPTYL CKGDGKWTIL TGGCRCKAGY EPNYTNKTCT 300
  301 ECPLGTFKSP EVTKCTPCPP NSNASKTGSP FCKCASGFYR HPNDGRHMPC YSPPAAPTNL 360
  361 TLLFVDQTSA IISWSAPAKN ESFSSETNSK IYHSDIVYKI KCNICSPNVV YNPSTDTFNE 420
  421 TKITLTNLEP VTTYTVQIHA INSVSHINEF KRHSNESSLV AVSDIVFSNT SLLNIPLDLN 480
  481 EVKTGQAEIV FTTESVLLST VFNLRILAIT NKDADLEWDK PVQSDFPLEF YEVRWFPKVE 540
  541 LDAINKSALN TKETKAHIVG LLENTEYGFQ VRCKTNNGFG SYSNMIYAQT LQSVGSVYDD 600
  601 SVQIRFIAGA IVTGVLFLVI FIIATVYFMR SKHQDDLDKK STNHLPLPLD YASNEVNSMD 660
  661 TTPIVKKLHL NVTTPLFGNS RSYVDPHTYE DPNQAIREFA REIDANYITI EAIIGVENLA 720
  721 MYVVVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle