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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60678223
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFLDMLIEPT LNRDLGSLTV ANSGLSAAHW KMEPHPQRIT SLAPHASSVA AASVAAAAAA  60
   61 AAAAAAAAAA GAGSGAVAGG GGATSTSPTS VQIPPGFGGG GSTGGIPPGA GGPTGSTLNT 120
  121 LMSQHRLLEF SRFGGLRGYD IAQHMLTQQG AVSKLLGSLR PPGLIGGSKP KVATPTVVSK 180
  181 IEQYKRENPT IFAWEIRERL ISEGVCTNAT APSVSSINRI LRNRAAERVA TEFARTAAYG 240
  241 LYPPPPHPYG SFTWHPAGNV PGGQGVPPPP PPSALWSVAA PTLANLPPSA ASAVPVSTCG 300
  301 SLSSAHLMAG GAGGTPTNRA ISPGSGSHDT LESADENRHI DSDYLDDDDE PKFRRNRTTF 360
  361 SPEQLEELEK EFDKSHYPCV STRERLSSRT SLSEARVQVW FSNRRAKWRR HQRMNLLKRQ 420
  421 RSSPANPLHS QQSNDAPASS PTPSNHSSAS TSAPVAPVPP PQQPLPLCGD HSPQGPPPSV 480
  481 LLHPLHGPPG GHHHHHPLHL PTHPAALHLL SHYHQQQQQQ QQQQHQQQQQ QHHQQQQQLS 540
  541 PSGCNPAANH LSMGGERSAF RSLVSSPSAA AFLGLARQYA VAASLTVAEE QRSRLHYSAG 600
  601 GLGSGGEGTG PNTNTTQSGG STMTVDNSSS DSDEEINVHD DSDGEIESSA ATAAKVAHLS 660
  661 SSDAPATLQF LKHDR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle