YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|161614855, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDAAEATKI FLYGNALPRG SRHHFQGRHS LGFIKQSTSS HARLNVPTLV QVAAMAIILI  60
   61 RGLDVLMIMN TLGIRGMGEF IHRSVQTWSL TLVFLASLVL VFVEIYCAFS LVKGRSWARW 120
  121 VYLATQIIVS GYLWAASLGY GYPELFSIAG ESKRDILHSL VMQKLPDLLI LFLLFIPAPS 180
  181 RRFFRLQ

Type	Start	End	Confidence
Cytoplasmic	1	43	0.96
Transmembrane Helix	44	68	0.78
Non-Cytoplasmic	69	87	0.83
Transmembrane Helix	88	109	0.92
Cytoplasmic	110	119	0.77
Transmembrane Helix	120	138	0.94
Non-Cytoplasmic	139	164	0.80
Transmembrane Helix	165	184	0.80
Cytoplasmic	185	187	0.87