YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57640800, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTKLFGAL LLVAIVFVSG CIGGSGSSTT PSQTQSTSTP SATLSTTPSS TQTPTETATK  60
   61 SCECPKAKPY YPLTITDFAG RNVTIEKEPK RIVSLAPSIT ETLYFLGALD RVIGVTKFDD 120
  121 YPPGVQEGRK IIGGFSDPNI EVIASLEPDL IIGTSMHLQY LDQLEKIAPV IILDPKNMDE 180
  181 VYEAVELLGK VLNQSERAEG VVEFMKAEVA DVQFRVSNKT RPKVLFISWW NPLYVPGNGT 240
  241 FQDSLIELAG GENVFHDATS WAQVSLEEAV ARNPEIIILS AHAGATIDDI CNSPLADTDA 300
  301 VKNGRIYFVS DDNAISRPGP RLVEALEELS YFIHPEAYGY NFQPVTCPVE G

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	351	0.99