YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57159383, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLKSAYEIR EKYLRKDMLP TIFCPGCGIG SVLQFTLRAI DDLGLNQDEI VWVSGIGCSS  60
   61 RVPGFVNFDG LHTTHGRALA FATGIKLTNP DLKIIAFMGD GDAAAIGGNH LIHAIRRNLD 120
  121 VTVILINNFT YGMTGGQVAP TALKGLKGTT APYGQFENPF DIAQLAVSAG ANYVARWTVF 180
  181 NYLQGINSIK KALQKEGFTL VEFLSPCPIS FGRRNRMKTA PELIRWYQKI TVPLAKAKKM 240
  241 SPEELEGKIV IGEFADRDRP GLVREYREYI KRAKKMMGWE E

Type	Start	End	Confidence
Cytoplasmic	1	18	0.55
Transmembrane Helix	19	37	0.55
Non-Cytoplasmic	38	281	0.89