YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57159483, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLSALGEA LVLIGTFFYF LSALGLIRMP DVYNRMQTST KSATLGSLGV MVGVGLWAVG  60
   61 DGLSWSWFTK SVVIALFLLL TNPISAHALI RAAYKSGIPL WQGSVVDKYR EHLEAKEKAE 120
  121 TEASKEGGEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.86
Transmembrane Helix	7	27	0.92
Cytoplasmic	28	41	0.76
Transmembrane Helix	42	60	0.93
Non-Cytoplasmic	61	66	0.73
Transmembrane Helix	67	90	0.83
Cytoplasmic	91	130	0.93