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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77380640, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRIFSTLGF SLWIALLSPM VQAANLKALD VAALPGDRVE LKLSFDGPPP QPKGYTTDSP  60
   61 ARIALDLPGV ASQLASKTRD LGSGNARTAT VVEANNRTRL IISLTQLAPY DTRVEGNTVF 120
  121 VVVGQGSKAA APRTAARAPR AAPAAAPVRT YTPTARAIRG VDFQRGTAGE GNVVIDLSDP 180
  181 AIAPDIQEHD GKIILNFART QLPEPLRVRL DVKDFATPVQ FVNAGVSGDR ATITVEPSGT 240
  241 FDYSTYQTDN KLTVSIRPLT VDDLQKRNAD RNSYNGEKLS LNFQDIDVRS VLQLIADFTN 300
  301 LNLVASDTVQ GGITLRLQNV PWDQALDLVL KTKGLDKRKV GNVLLVAPAD EIAARERQEL 360
  361 ESQKQIAELA PLRRELLQVN YAKAADIAKL FQSVTSAEAK VDERGSITVD ERTNNIIAYQ 420
  421 TQDRLDELRR IVAQLDIPVR QVMIEARIVE ANVDYDKSLG VRWGGSIQNK GNWNTSGVSN 480
  481 GSSTTIGTPG STSTNSPFVD MGTVNNTSGI GIAFITDNVL LDLELTAMEK TGNGEIVSQP 540
  541 KVVTSDKETA KILKGTEIPY QEASSSGATS VSFKEASLSL EVTPQITPDN RIIMEVKVTK 600
  601 DEPDYLNKVQ DVPPIKKNEV NAKVLVNDGE TIVIGGVFSN TQSKVVDKVP FLGDVPYLGR 660
  661 LFRRDVVSEK KSELLVFLTP RIMNNQAIAV SR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle