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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56379040, gi|...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEGQRTVVI IGGGITGLTA AYYLQKAIRE QRLPLACKLV EATHRLGGKV QTVVRDGFVI  60
   61 ERGPDSFLAR KTSAFRLVKE VGLEHEIVHN ATGTSYILVN GKLYPIPGGA VMGIPTRIAP 120
  121 FLTTGLFSPA GKLRAALDFV LPPVKVDGDM PLGRFFRRRL GDEVVDNLIE PLLSGIYAGD 180
  181 IDEMSLMATF PQFFQLEQKY GSLVRGARRT TPKEQKERKG AFQTLKTGLQ SLVDEVEKRL 240
  241 EPGSVIKGVR VERIVRTDSA YRLQLSTGEV WGADGIIVTT PHHVVPDMFA DYPFFAPFRS 300
  301 VPLTSVATVA LAFPEEAIRQ DIDGTGFVVS RRSDYTMTAC TWTHKKWPHT APPGKALLRC 360
  361 YVGRPGDEEI VDQPDDEIVR VVLDDLNKVM NIAGQPEFAV ISRWKRAMPQ YTVGHRERLA 420
  421 HIKRQMGDAL PGVFLAGSSY EGLGLPDCID QGEKAVRDVL LYLQQAPVQQ TSDLYSSVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle