YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56421761, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKAVGLLAT LLLAGGVLGG CSLDQNNASS DKGKTKQDGE VKIGLSISTL NNPFFVTLKE  60
   61 GAEKAAKDEG AELIVVDAQN DSAKQINDIE DLIQQKVDVL LVNPTDSSAV ASAIESANSA 120
  121 NIPVITVDRS ADGGKVVTHI ASDNVAGGKM AAQFLVDHLK NGGNIVELEG IPGSSAARER 180
  181 GEGFHQVIDK AANMKVVAKQ AADFDRAKGL AVMENILQSH KDIQAVFAHN DEMALGALEA 240
  241 LQAHGMNNVL VVGFDATDDA VKAVKEGKMA ATVAQKPALI GEKAVEAAIR VHKGEKVEKF 300
  301 IPVPLELVQG Q

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	311	0.99