YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678696, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIASLIGTV GGVGYLRPAP GTWGSLAALP LAWVLHQLGG FPLLALATLG AFVAGLWATR  60
   61 VMTAGQTDHD PSEIVIDEVA GQFLALWALS LPAWSHGIEI SALWPGWIAA FVLFRLFDIT 120
  121 KPGPVGWADR RGDPMGVMLD DIIAGLFAAI GTALLAALSH GVLGL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.68
Transmembrane Helix	13	35	0.63
Non-Cytoplasmic	36	37	0.47
Transmembrane Helix	38	61	0.82
Cytoplasmic	62	73	0.58
Transmembrane Helix	74	98	0.49
Non-Cytoplasmic	99	99	0.43
Transmembrane Helix	100	119	0.79
Cytoplasmic	120	136	0.70
Transmembrane Helix	137	160	0.86
Non-Cytoplasmic	161	165	0.59