YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679803, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEQTGAVS TCVDSYGSAI GMPQLCFDWF PNQIFWLVIT LVVVFLVLSR VALPRIAAIL  60
   61 AERQGTITND LAAAEDLKAK AAAAEEAYTK ALADARAEAQ RIAAEARAEI QAGLNDAIAK 120
  121 ADAEIAAKAA ESEKVIAGIR AGALESIEAV AKDTAEALVD ALGGKAEAAS VAGAVDQRMK 180
  181 G

Type	Start	End	Confidence
Non-Cytoplasmic	1	32	0.81
Transmembrane Helix	33	53	0.92
Cytoplasmic	54	181	0.93