YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68249166, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSFSQRRTF MKPYLIAPSI LSADLARLGD DVQNVLNAGA DVIHFDVMDN HYVPNLTFGP  60
   61 AVCQALRDYG ITAPIDVHLM VKPIDRIIPD FAKAGANYIT FHPESSEHID RSLQLIRDCG 120
  121 CKSGLVFNPA TPLSYLDYVL DKVDVVLLMS VNPGFGGQSF IPATLKKLQQ ARKIIDESGY 180
  181 DIRLEVDGGV KVDNIAEIAA AGADMFVAGS AIFGKPDYKQ VIDQIRTQLA SVSA

Type	Start	End	Confidence
Signal Peptide	1	26	0.55
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	234	0.99