YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71834668, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANEISYDNR NIVEKYLKHK LSKRGYVWKC QSSAEEDDTF NKAVEESSPN SDRRLQAPSA  60
   61 GGGNNSECLI ARVTRSDPHL RLYRVLRDAG DEIERIYQRE FEEMSQQMVF NPNSAQRSFL 120
  121 TVAEELFRDG VNWGRIIAFF EFGGTMCVES VNREMASQVD NIAHWMTDYL NGPLENWIEE 180
  181 NGGWDAFVEM YGQQRDSVFH PFSYLTKVLG LAALGLAGVT IGAFFAQK

Type	Start	End	Confidence
Cytoplasmic	1	203	0.52
Transmembrane Helix	204	226	0.89
Non-Cytoplasmic	227	228	0.50