YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66771583, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIKVWRLLG QSCRRSTALV RHRSSRMPWL PISIMAMALL SLTNKGIASQ YASDEGLDEM  60
   61 VGLRSLEHRA EEQQPDRSTS KMLSALFGFS PSTPHPTEMA MVMPHQLPPM YYNDFYEDLV 120
  121 TTKRNDVHSA GCDCKVTNEL VDLGGLHFPR FLMNAVCESG AGRDLAKCSH GSNCRPLEYK 180
  181 VKVLAQTSQS DHPYSWMNKD QPWQFKTVTV TAGCFCTK

Type	Start	End	Confidence
Signal Peptide	1	48	0.68
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	218	0.99