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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66771849
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIRGTTLLGI GILFVGCGAF SLPSVYDVLS KDQQATSFVS ASIAEEISRE YLKYHRTGIE  60
   61 TERLRQLGKD IRSSHSKKAI FTESMADLTS TDQFFVCTLC RSTINVFART FTEGELSGPE 120
  121 RDDEAKKLML GMCDYFAIST QEVCSGLFDL NWPILDFILN ETVAKSNTFC SMLPIPICQV 180
  181 KQDEYNLTLS IQGDLPQESN SNLPAKTSED ILVLHLTDIH YDPEYAEGSN AACDEPMCCR 240
  241 NSLPEGSDSS AAAGFWSDYR DCDCPKRLIL SAFEHIKENH KIEWIYHTGD VPPHNVWSTT 300
  301 RQGNLDMLSE IDELLAKYFP DTPIYPCLGN HEPHPANVFG NDEIPSSLRV DWLYEHVWSL 360
  361 WSKWLPAEAE ETVLRGGYYT ASPSKGHRIV ALNSMDCYLY NWWLFYNATL IQEQLQWFHD 420
  421 TLLSAEEAGE SVHILTHIPA GDGDCWCNWS QEYNRVLTRF NGIITGVFSG HTHKDEMNLH 480
  481 YSEDGYATVV NWNGGSLTSY SNKNPNYRLY ELHPENWQVL DHHTYTFNLT EANLTPDEQP 540
  541 KWELEYQFTK EYTEDTSPAG IDRLLLEMAE KPDLLRKFWR NKFTNSDPKL AEGCDNACLS 600
  601 KTICRIATSN YQERTRCKEL QAILAESLEN EPDTDDNNGG GAAGLSALSL ASLLALLAAS 660
  661 KLLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle