YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85774325, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSPVTSAL GALPQPGQAP APASSALGKD AFLKLLTTQL QHQDPLSPMD SQAFVAQLAQ  60
   61 FSSVEQLGAL GDKLDTLAVA QASSNQLGTA ALVGKEVLFR ADRVRLEPGA PARFEVTLPA 120
  121 DAGEGVAILA DASGRVVRTL QLGAHEAGTF QVSWDGRDAS GEPLPAGDYL LTVSATRPDG 180
  181 TELDAATSLR GTVTGVTFEN QAPELLVGGR HVKLSDVLQL AAPAA

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	225	0.99