YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|147898663, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFFDNLRC SECIDWGEKR NTVASVAAGV LFFTGWWIII DAAVIYPDTE RLNHAYHACG  60
   61 VIATVAFLMI NAVSNGQVRG ESYSEGCLGQ TGARIWLFIG FMLSFGSLIA SMWILFGGYV 120
  121 ANGNPVVYPG IAIFFQNAFI FFGGLVFKFG RTEDLWQ

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	40	0.93
Non-Cytoplasmic	41	53	0.76
Transmembrane Helix	54	74	0.95
Cytoplasmic	75	94	0.91
Transmembrane Helix	95	116	0.95
Non-Cytoplasmic	117	126	0.82
Transmembrane Helix	127	149	0.89
Cytoplasmic	150	157	0.92