YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63100600, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFVAVIVAL AVISGCQGRF LFQDEPRSRW EEAVDQFWNH VSELTTRAEE MRDNIKATQL  60
   61 GRELDTLISD SMMELQMYRD DLHSKLAPYA QERAQKFNED LQLLVTKLRT HMEEAKDRVT 120
  121 EYTEELRTMV EQNSDELKNK ANSYAKKLRK RFNKDIQEIN KKMSTYLEEV QSRASQSVED 180
  181 VKDRLEPYFT SMHERAQQKL VNLREALRSQ AEEIKERLDS RMQELRDQVE KTKENVHNTL 240
  241 QQKAEDVQKW FEPYVSHIQK QMEPVWESL

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	269	0.99