YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67083335
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLASAFR LGVSRACVQL PSDAGISSKR LFHVAPRLLG PEVLKPAPAF KGKAVVDGQF  60
   61 KDISLADYKG KYLVLFFYPL DFTFVCPTEI IAFSDRADEF RKINTELVAV SVDSHFSHLA 120
  121 WTNTPRKQGG LGKMNIPLLS DFNKQIARDY GVLLEDAGLA LRGLFIIDPK GVVRQITVND 180
  181 LPVGRSVDET LRLVKAFQFV EKHGEVCPAG WQPDSPTNKP DPKNSQEFSA KST

Type	Start	End	Confidence
Signal Peptide	1	16	0.91
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	233	0.99