YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215740796, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAAAVA CGMSTSFLIR LSPSPPASSH VPLPRSPASS ARPRRASSVS LSTAPRPRAR  60
   61 AAGSDSPSNF GGQTSLMPPF SLMLDEGSRS KKPYRWQRVL LKVSGEALAG DHTENIDPKI 120
  121 TMAIAREVAS VTRLGVEVAI VVGGGNIFRG ASWAGCSGLD RSSADYIGML ATVMNAIFLQ 180
  181 ATMESIGIPT RVQTAFRMSE VAEPYIRRRA VRHLEKGRVV IFAAGTGNPF FTTDTAAALR 240
  241 CAEINAEVVL KATNVDGVYD ADPKRNPNAR LLEAVSYHEV QTRDLSVMDM TAITLCQENN 300
  301 IPVVVFNLQK PGNIAKAIVG EKVGTFIGCT KDQDQIVGNA LDQERRLVNE L

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	351	0.99