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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58219488, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHFTVVPVD GPRRGDYDNL EGLSWVDYGE RAEREDADGH GNHRESSPFL CPLEASRGND  60
   61 YYDRNLALFE EELDIRPKVS SLLGKLVSYT NLTQGAKEHE EAESGEDTRR RAAKAPSMGT 120
  121 LMGVYLPCLQ NIFGVILFLR LTWMVGTAGV LQALLIVLIC CCCTLLTAIS MSAIATNGVV 180
  181 PAGGSYFMIS RSLGPEFGGA VGLCFYLGTT FAAAMYILGA IEILLTYIAP PAAIFHPTGA 240
  241 HDTSSATLNN MRVYGTIFLT FMTLVVFVGV KYVNKFASLF LACVIISILS IYAGGIKSIF 300
  301 EPPVFPVCML GNRTLSRDQF DVCAKTTVTN NETVATQLWK LFCRSSNLTT DSCDPYFLVN 360
  361 NVTEIPGIPG AAAGVLQENL WSAYLEKGEV VEKQGLPSTD ALGLKESLPL YVVADIATSF 420
  421 TVLVGIFFPS VTGIMAGSNR SGDLRDAQKS IPVGTILAIV TTSLVYFSSV VLFGACIEGV 480
  481 VLRDKYGDGV SRNLVVGTLA WPSPWVIVIG SFFSTCGAGL QSLTGAPRLL QAIAKDNIIP 540
  541 FLRVFGHGKA NGEPTWALLL TALIAELGIL IASLDMVAPI LSMFFLMCYL FVNLACAVQT 600
  601 LLRTPNWRPR FKYYHWALSF LGMSLCLALM FVSSWYYALV AMLIAGMIYK YIEYQGAEKE 660
  661 WGDGIRGLSL SAARYALLRL EEGPPHTKNW RPQLLVLLKL DEDLHVKYPR LLTFASQLKA 720
  721 GKGLTIVGSV IQGSFLESYG EAQAAEQTIK NMMEIEKVKG FCQVVVASKV REGLAHLIQS 780
  781 CGLGGMRHNS VVLGWPYGWR QSEDPRAWKT FIDTVRCTTA AHLALLVPKN IAFYPSNHER 840
  841 YLEGHIDVWW IVHDGGMLML LPFLLRQHKV WRKCRMRIFT VAQMDDNSIQ MKKDLAVFLY 900
  901 HLRLEAEVEV VEMHNSDISA YTYERTLMME QRSQMLRQMR LTKTEREREA QLVKDRHSAL 960
  961 RLESLYSDEE DESAAGADKI QMTWTRDKYM AAEPWDPSHA PDNFRELVHI KPDQSNVRRM1020
 1021 HTAVKLNEVI VTRSHDARLV LLNMPGPPKN SEGDENYMEF LEVLTEGLER VLLVRGGGRE1080
 1081 VITIYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle