YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62821757
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLLALSL LAATSAPVLA ADYSDGDIHK NDYKWMQFNL MGAFDELPGK SSHDYLEMEF  60
   61 GGRSGIFDLY GYVDVFNLTS DKGSDKNGKE KIFMKFAPRV SLDALTGADM SFGPVQEMYL 120
  121 ATLIEWGGNS DVNSQKIGLG SDVMVPWFGK VGLNLYGTYD SNEKDWNGFQ ISTNWFKPFY 180
  181 FLENGSFISY QGYIDYQFGM DNDNKALNTS NGGAMFNGIY WHSDRFAVGY GLKAYKDVYG 240
  241 LKDDGLAGKT SGFGHYVAVT YKFSEFEA

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.99