YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NB5R2_XENTR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISTDSNML VALAVIGVTV LLFLIKALGS QAKKAPLTLL DPNAKYPLPL IEKQEISHDT  60
   61 KKFRFGLPSQ EHVLGLPVGQ HVYLSAKING SLVVRAYTPV SSDEVKGHVD LIVKVYYKNV 120
  121 HPKFPEGGKM SQHLDSLKIG ETIDFRGPNG LLVYKEKGKF AIRPDKKSEP KLKVAKHVGM 180
  181 LAGGTGITPM LQLIRQITQD PNDNTKCSLI FANQTEDDIL LRYELETVAK SHPEQFKLWY 240
  241 TLDRPPQGWK YGAGFVTADM IKEHLPPPSE DVVVLMCGPP PMIQFACQDN LTKLGYPEAG 300
  301 RFAY

Type	Start	End	Confidence
Signal Peptide	1	29	0.63
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	304	0.86