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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67969054
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHQAVAF QFTVTPEGVD FRLSREALKH VYLSGINSWK KRLIRIKNGI LRGVYPGSPT  60
   61 SWLVVVMATV GSSFCNVDVS LGLVGCIQRC PPQGCGPYQT PQTRALLSMA IFSTGVWVTG 120
  121 IFFFRQTLKL LLSYHGWMFE MHGKTSNLTR IWAMCVRLLS SRHPMLYSFQ TSLPKLPVPR 180
  181 VSATIQRYLE SVRPLLDDEE YYRMEMLAKE FQNKTAPRLQ KYLVLKSWWA SNYVSDWWEE 240
  241 YIYLRGRSPL MVNSNYYVMD LVLIKNTDVQ AARLGNIIHA MIMYRRKLDC EEIKPVMALG 300
  301 IVPMCSYQME RMFNTTRVPG KETDVLQHLS DSRHVAVYHK GRFFKLWLYE GSRLLKPQDL 360
  361 EMQFQRILDD PSPPQPGEEK LAALTAGGRV EWAQARQAFF SSGKNKAALE AIERAAFFVA 420
  421 LDEESYRYDP EDEASLSLYG KALLHGNCYN RWFDKSFTLI SFKNGQLGLN AEHAWADAPI 480
  481 IGHLWEFVLG TDSFHLGYTE TGHCLGKPNP ALPPPTRLQW DIPKQCQAVI ESSYQVAKAL 540
  541 ADDVELYCFQ FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DRGKFCLTYE ASMTRMFREG 600
  601 RTETVRSCTS ESTAFVQAMV EKSHAKADLR DLFQKAAKKH QNMYRLAMTG AGIDRHLFCL 660
  661 YLVSKYLGVS SPFLAEVLSE PWRLSTSQIP QSQIRMFDPE QHPNHLGAGG GFGPVADDGY 720
  721 GVSYMIAGEN TIFFHISSKF SSSETNAQRF GNHIRQALLD LADLFQVPKT DS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle