YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109107398
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPVVSASG PPATPAPAPV AAPASASASV PAPTPAPAAA AVPAAAPAAS SDPAAAAATT  60
   61 AAPGQTPASA QAPAQTPAPA LPGPALPGPF PGGRVVRLHP VILASIVDSY ERRNEGAARV 120
  121 IGTLLGTVDK HSVEVTNCFS VPHNESEDEV AVDMEFAKNM YELHKKVSPN ELILGWYATG 180
  181 HDITEHSVLI HEYYSREAPN PIHLTVDTSL QNGRMSIKAY VSTLMGVPGR TMGVMFTPLT 240
  241 VKYAYYDTER IGVDLIMKTC FSPNRVIGLS SDLQQVGGAS ARIQDALSTV LQYAEDVLSG 300
  301 KVSADNTVGR FLMSLVNQVP KIVPDDFETM LNSNINDLLM VTYLANLTQS QIALNEKLVN 360
  361 L

Type	Start	End	Confidence
Signal Peptide	1	40	0.89
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	361	0.99