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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88603925, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.66
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRTRVLLL YLCIITLVLV CLGVIMPSSI HEKNLQTIHA DTENQLQHID FALSNFIQEV  60
   61 EQDISELLLH DIITDPDDTG FTNFLNASED TFVYSIGPRE AKIINDLNAF RLTHPSVNSV 120
  121 YMGRETGTFV RSHPRPRPTR YDPRDRPWYI LGKENPDKIM MTEPYMSVTS PDINIGIVKA 180
  181 LTYPNGTVYG VLGADITLTN LTRYISSFDI GRSGEIMLVN ESGIILASRN ESALFTNIRE 240
  241 SLGEAQTEYL LSTSRGILTL PSAYLIFYTS PMLGWKLLIT IPYHEIEKEI MASMMYMLLF 300
  301 VFLALILLSI TTLIILDKTI IRPLSYLTDI TKNITETGNL NQKIELHTKG EVQELAKSFE 360
  361 RMIGKIKEEE EQKNKAFNEL SSYRDHLEDL VRERTQQLEA ANTDLITERN RAEEADQLKS 420
  421 AFLATMSHEL RTPLNSIIGF TGIILQGLAG PLNKEQEKQL GMVQDSARHL LALINDVLDI 480
  481 SKIEAGELNI SREPVNIQKS IESVCTTLRK SAEDKGLSLH VDISPDTGFI IGDQRRIEQI 540
  541 LINLINNAIK FTERGYVCVK SSLREKNVCI SVSDTGIGIS EEEMKKLFRP FQQIDTGTTR 600
  601 KHEGTGLGLS ICKKLVELHG GTIMVTSEPG KGSEFTVILP AGEELS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle