YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61661429
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSRFFFVS IFFYLSQESS LELSKKLSGA NSSLTEHDED DYEHAHKRPR TWSADSTPEV  60
   61 DGDMCVIFSA SEGDPTKCWC PRGYIMCSEE DVRDVQSKLY EIKDLKQRNE VTPPWMKRLC 120
  121 DNSEEIGFKS MSVVIDYELA VLCNDGHEKG NADFKIIGAS GFVPNEKIIQ QKERDITYVP 180
  181 RKCTVNNFYL CRKVEDDNVG CQFSPWSPWG PCVNNKQRRT RKVMRSNQNN ENFCLWNGKR 240
  241 IPRSIIEDTR PCKIALEATN QN

Type	Start	End	Confidence
Signal Peptide	1	21	0.90
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	262	0.99