YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63100927, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDILWILWT LPSVLAIEEI LMDSTTATAE LGWTVYPVSG TSDSSWEEVS GYDENMNTIR  60
   61 TYQVCNVFDA NQNNWVRTKY IRRRGAQRIH VEMKFSVRDC SSIPRVPGSC KETFNLYYYE 120
  121 SDSDTATKTF PPWMENPWIK VDTIAADESF SQVDLGGRVM KINTEVRSFG PVSRNGFYLA 180
  181 FQDYGGCMSL IAVRVFYRKC PRTIRNGAIF QETLSGAEST SLVAARGVCI PNAEEVDVPI 240
  241 KLYCNGDGEW MVPIGRCMCK AGHEAVENGT VCRACPSGFF KTAQGDEKCL QCPINSRTTN 300
  301 DGATNCVCRN GYYRTDSDPL EMPCTTVPSA PQNVISSVNE TSLMLEWNPP RETGGRDDVV 360
  361 YNIICKSCGG GRGGCTRCGD NVQFIPRQLG LTESRVFISD LLLLN

Type	Start	End	Confidence
Signal Peptide	1	16	0.94
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	405	0.98