YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125814541, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLSVSSRHGG WQDQKRRHYS LQPVVRQHRP SICKPSDVQY LQIDLRQLIF LTVVATQGRY  60
   61 ARNSGIEFAR KYRLEYSRDG HRWISWRNRF GNEIIMGNVN TYDTVVRDLH PPIITRFLRL 120
  121 IPVTDAVHTV CMRVELFGCA WQDGLMAYSS PEGQIMMAPG FPITSLNDST YDGPLERRKL 180
  181 SGGLGQLADG VVGLDDFVES RQYRLWPGYD YVGWRNDGLG PGYVEMEFQF DRQRNFTSMK 240
  241 VHSNNMFSMG VKIFSSVSCV FKLHLISEWE SEPVEFHTVI DDRNPSARYV TIPLKHRSAT 300
  301 ALRCRFYFAD TWMMFSEISF QSEDWTTPTK TGSPEEGNTS ILIGCLVTII LLLVVIIFLI 360
  361 LWCQYVCKVL EKAPRRILEE EVAVRLSSSS DTIILQTPPV PPRVSIDPPY ERIFLLDPQY 420
  421 QDPAALRNKL PELSQSAETS ACSGGYAEPD VTLCTPHQSF QSSAPHYAET DIISLQGVTG 480
  481 SNMYSVPALT VDSLTRKDIS VAEFPRQRLL FREKLGEGQF GEVHLCEAEG LAEFLGEGAP 540
  541 LPEQDGRPVL VAVKQLRADA TSNARNDFLK EIKIMSRLNN PNIIQLLCVC VSSDPLCMVT 600
  601 EYMENGDLNM FLSQREIEST LTHANNIPSV SIADLLHMSV QISSGMKYLA SLNFVHRDLA 660
  661 TRNCLLDRHL TIKISDFGMS RNLYSSDYYR IQGRAVLPIR WMAWESILLG KFTTASDVWA 720
  721 FGVTLWEIFT LCKEQPYSLL SDEQVIENTG EFFRNQGRQI FLSAPPLCPS SLFKLMMRCW 780
  781 SRDITDRPSF NKLHQALRTF APHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle