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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56800448
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVKLEKNGIG YHYILANLGF MDIDLNKFKE SGANVTGFQL VNYTDTIPAR IMQQWRTSDA  60
   61 RDHTRVDWKR PKYTSALTYD GVKVMAEAFQ SLRRQRIDIS RRGNAGDCLA NPAVPWGQGI 120
  121 DIQRALQQVR FEGLTGNVQF NEKGRRTNYT LHVIEMKHDG IRKIGYWNED DKFVPAATDA 180
  181 QAGGDNSSVQ NRTYIVTTIL EDPYVMLKKN ANQFEGNDRY EGYCVELAAE IAKHVGYSYR 240
  241 LEIVSDGKYG ARDPDTKAWN GMVGELVYGR ADVAVAPLTI TLVREEVIDF SKPFMSLGIS 300
  301 IMIKKPQKSK PGVFSFLDPL AYEIWMCIVF AYIGVSVVLF LVSRFSPYEW HSEEFEEGRD 360
  361 QTTSDQSNEF GIFNSLWFSL GAFMQQGCDI SPRSLSGRIV GGVWWFFTLI IISSYTANLA 420
  421 AFLTVERMVS PIESAEDLAK QTEIAYGTLE AGSTKEFFRR SKIAVFEKMW TYMKSAEPSV 480
  481 FVRTTEEGMI RVRKSKGKYA YLLESTMNEY IEQRKPCDTM KVGGNLDSKG YGIATPKGSA 540
  541 LRNPVNLAVL KLNEQGLLDK LKNKWWYDKG ECGSGGGDSK DKTSALSLSN VAGVFYILIG 600
  601 GLGLAMLVAL IEFCYKSRSE SKRMKGFCLI PQQSINEAIR TSTLPRNSGA GASGGSGSGE 660
  661 NGRVVSQDFP KSMQSIPCMS HSSGMPLGAT GL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle