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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56541778|emb|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPRGRSEP PQLPEYSCSY VVSRPVYSEL AFQQQHERRL QERKTLRESL AKGCSCSRKR  60
   61 AFGVLKTLVP ILEWLPKYRV KEWLLSDIIS GVSTGLVATL QGMTYALLAA VPVGYGLYSA 120
  121 FFPILTYFIF GTSRHISVGP FPVVSLMVGS VVLSMAPNEH FLISSSNGTV LNTTMIDTAA 180
  181 RDTARVLIAS ALTLLVGIIQ LIFGGLQIGF IVRYLADPLV GGFTTAAAFQ VLVSQLKIVL 240
  241 NVSTKNYNGV LSIIYTLVEI FQNIGDTNLA DFTAGLLTIV VCMAVKELND RFRHKIPVPI 300
  301 PIEVIVTIIA TAISYGANLE KNYNAGIVKS IPRGFLPPEL PPVSLFSEML AASFSIAVVA 360
  361 YAIAVSVGKV YATKYDYTID GNQEFIAFGI SNIFSGFFSC FVATTALSRT AVQESTGGKT 420
  421 QVAGIISAAI VMIAILALGK LLEPLQKSVL AAVVIANLKG MFMQVCDVPR LWRQNKIDAV 480
  481 IWVFTCIVSI ILGLDLGLLA GLIFGLLTVV LRVQFPSWNG LGSIPSTDIY KSTKNYKNIE 540
  541 EPRGVKILRF SSPIFYGNVD GFKKCIKSTV GFDAIRVYNK RLKALRKIQK LIKNGQLRAT 600
  601 KNGIISDAGS TNNAFEPDED IEDPEELDIP TKEIEIQVDW NSELPVKVNV PKVPIHSLVL 660
  661 DCGAISFLDV VGVRSLRVIV KEFQRIDVNV YFASLQDYVI EKLEQCGFFD DNIRKDTFFL 720
  721 TVHDAILYLQ NQVKSQEGQD SILETITLIQ DCKDTLELIE TELTEEELDV QDEAMRTLAS 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle