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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119606466, gi...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLSFHAGS WESWCCCCLI PADRPWDRGQ HWQLEMADTR SVHETRFEAA VKVIQSLPKN  60
   61 GSFQPTNEMM LKFYSFYKQA TEGPCKLSRP GFWDPIGRYK WDAWSSLGDM TKEEAMIAYV 120
  121 EEMKKIIETM PMTEKVEELL RVIGPFYEIV EDKKSGRSSD ITSDLGNVLT STPNAKTVNG 180
  181 KAESSDSGAE SEEEEAQEEV KGAEQSDNDK KMMKKSADHK NLEVIVTNGY DKDGFVQDIQ 240
  241 NDIHASSSLN GRSTEEVKPI DENLGQTGKS AVCIHQDIND DHVEDVTGIQ HLTSDSDSEV 300
  301 YCDSMEQFGQ EESLDSFTSN NGPFQYYLGG HSSQPMENSG FREDIQVPPG NGNIGNMQVV 360
  361 AVEGKGEVKH GGEDGRNNSG APHREKRGGE TDEFSNVRRG RGHRMQHLSE GTKGRQVGSG 420
  421 GDGERWGSDR GSRGSLNEQI ALVLMRLQED MQNVLQRLQK LETLTALQAK SSTSTLQTAP 480
  481 QPTSQRPSWW PFEMSPGVLT FAIIWPFIAQ WLVYLYYQRR RRKLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle