YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56417672
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPGCPRLWV LVVLGTSWVG WGSQGTEAAQ LRQFYVAAQG ISWSYRPEPT NSSLNLSVTS  60
   61 FKKIVYREYE PYFKKEKPQS TISGLLGPTL YAEVGDIIKV HFKNKADKPL SIHPQGIRYS 120
  121 KLSEGASYLD HTFPAEKMDD AVAPGREYTY EWSISEDSGP THDDPPCLTH IYYSHENLIE 180
  181 DFNSGLIGPL LICKKGTLTE GGTQKTFDKQ IVLLFAVFDE SKSWSQSSSL MYTVNGYVNG 240
  241 TMPDITVCAH DHISWHLLGM SSGPELFSIH FNGQVLEQNH HKVSAITLVS ATSTTANMTV 300
  301 GPEGKWIISS LTPKHLQAGM QAYIDIKNCP KKTRNLKKIT REQRRHMKRW EYFIAAEEVI 360
  361 WDYAPVIPAN MDKKYRSQHL DNFSNQIGKH YKKVMYTQYE DESFTKHTVN PNMKEDGILG 420
  421 PIIRAQVRDT LKIVFKNMAS RPYSIYPHGV TFSPYEDEVN SSFTSGRNNT MIRAVQPGET 480
  481 YTYKWNILEF DEPTENDAQC LTRPYYSDVD IMRDIASGLI GLLLICKSRS LDRQGIQRAA 540
  541 DIEQQAVFAV FDENKSWYLE DNINKFCENP DEVKRDDPKF YESNIMSNFT LSAINGYVPE 600
  601 SITTLGFCFD DTVQWHFCSV GTQNEILTIH FTGHSFIYGK RHEDTLTLFP MRGESVTVTM 660
  661 DNVGTWMLTS MNSSPRSKKL RLKFRDVKCI PDDDEDSYEI FEPPESTVMA TRKMHDRLEP 720
  721 EDEESDADYD YQNRLAAALG IRSFRNSSLN QEEEEFNLTA LALENGTEFV SSNTDIIVGS 780
  781 NYSSPSNISK FTVNNLAEPQ KAPSHQQATT AGSPLRHLIG KNSVLNSSTA EHSSPYSEDP 840
  841 IEDPLQPDVT GIRLLSLGAG EFKSQEHAKH KGPKVERDQA AKHRFSWMKL LAHKVGRHLS 900
  901 QDTGSPSGMR PWEDLPSQDT GSPSRMRPWK DPPSDLLLLK QSNSSKILVG RWHLASEKGS 960
  961 YEIIQDTDED TAVNNWLISP QNASRAWGES TPLANKPGKQ SGHPKFPRVR HKSLQVRQDG1020
 1021 GKSRLKKSQF LIKTRKKKKE KHTHHAPLSP RTFHPLRSEA YNTFSERRLK HSLVLHKSNE1080
 1081 TSLPTDLNQT LPSMDFGWIA SLPDHNQNSS NDTGQASCPP GLYQTVPPEE HYQTFPIQDP1140
 1141 DQMHSTSDPS HRSSSPELSE MLEYDRSHKS FPTDISQMSP SSEHEVWQTV ISPDLSQVTL1200
 1201 SPELSQTNLS PDLSHTTLSP ELIQRNLSPA LGQMPISPDL SHTTLSPDLS HTTLSLDLSQ1260
 1261 TNLSPELSQT NLSPALGQMP LSPDLSHTTL SLDFSQTNLS PELSHMTLSP ELSQTNLSPA1320
 1321 LGQMPISPDL SHTTLSLDFS QTNLSPELSQ TNLSPALGQM PLSPDPSHTT LSLDLSQTNL1380
 1381 SPELSQTNLS PDLSEMPLFA DLSQIPLTPD LDQMTLSPDL GETDLSPNFG QMSLSPDLSQ1440
 1441 VTLSPDISDT TLLPDLSQIS PPPDLDQIFY PSESSQSLLL QEFNESFPYP DLGQMPSPSS1500
 1501 PTLNDTFLSK EFNPLVIVGL SKDGTDYIEI IPKEEVQSSE DDYAEIDYVP YDDPYKTDVR1560
 1561 TNINSSRDPD NIAAWYLRSN NGNRRNYYIA AEEISWDYSE FVQRETDIED SDDIPEDTTY1620
 1621 KKVVFRKYLD STFTKRDPRG EYEEHLGILG PIIRAEVDDV IQVRFKNLAS RPYSLHAHGL1680
 1681 SYEKSSEGKT YEDDSPEWFK EDNAVQPNSS YTYVWHATER SGPESPGSAC RAWAYYSAVN1740
 1741 PEKDIHSGLI GPLLICQKGI LHKDSNMPMD MREFVLLFMT FDEKKSWYYE KKSRSSWRLT1800
 1801 SSEMKKSHEF HAINGMIYSL PGLKMYEQEW VRLHLLNIGG SQDIHVVHFH GQTLLENGNK1860
 1861 QHQLGVWPLL PGSFKTLEMK ASKPGWWLLN TEVGENQRAG MQTPFLIMDR DCRMPMGLST1920
 1921 GIISDSQIKA SEFLGYWEPR LARLNNGGSY NAWSVEKLAA EFASKPWIQV DMQKEVIITG1980
 1981 IQTQGAKHYL KSCYTTEFYV AYSSNQINWQ IFKGNSTRNV MYFNGNSDAS TIKENQFDPP2040
 2041 IVARYIRISP TRAYNRPTLR LELQGCEVNG CSTPLGMENG KIENKQITAS SFKKSWWGDY2100
 2101 WEPFRARLNA QGRVNAWQAK ANNNKQWLEI DLLKIKKITA IITQGCKSLS SEMYVKSYTI2160
 2161 HYSEQGVEWK PYRLKSSMVD KIFEGNTNTK GHVKNFFNPP IISRFIRVIP KTWNQSIALR2220
 2221 LELFGCDIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle