YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM46_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPTRRTVL GLARCWRRFE SPWSLGSRSL TLAAAPSNSA SPWRLLGALC LQRPPLVSKQ  60
   61 LTPMQEEMAA LLQQMEIERS LYSDHELRAL DEAEQLEKKK SDLYEEKDEK NILLVQDLED 120
  121 MWEQKFLQFK PGARITDADV KNDRSSLHRK LDRNLILLVK DKLGDQDVWM LPQAEWQPGE 180
  181 TLRQTAERTL ATLSENNLEA KFLGNAPCGH YKFKFPQAVR AEGSLGAKIF FFKALLLTGD 240
  241 FSPAVEKGRH VWASKEELGD YLKPKYLAQV RRFLLDL

Type	Start	End	Confidence
Signal Peptide	1	39	0.86
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	277	0.99