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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94497919, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLFGMTPA RSSTLLPFAL LILMIPPFLA DMALPLGMSV WVLYLLPLTL SYMTSRAIIP  60
   61 PLLAVIATLL MAIGYQIAPA GVDPTVAQVN RSLGGLTAWL LGGLGYAFIR TKLAVRREEW 120
  121 VQRSQIGLGR AMAGERNLQT LGEDLLRNLV TRLDAQAALL FVDDGAAYRR VASIGVPQGA 180
  181 DIISSTGPDD GLIGVAITER RIVRVGPVPP SYLAYGAGMG QAAPTTMLVA PACADDDVVA 240
  241 VLEIGFAQEP DAQALILLER AGEAIGKAIR AARYRERLQE LLEETQQQSE ELQAQSEELR 300
  301 SANEELEEQS RVLLDSQARL ETQQAELEQT NVELEEQTQQ LVQQRNDLTR AQASLEEQAR 360
  361 ELEQASRYKS EFLANMSHEL RTPLNSLLIM ARLLADNRAG NLTAEQVRHA ETIETSGNDL 420
  421 LLLINDILDI SKIEAGHVDL QTRPMRIAPM VEKLHALLEP GARQKGIALR IPAASAMPVE 480
  481 IESDPHRVEQ ILKNFLSNAI KFTDKGEVTL TVEEAGDDAI AFTVHDTGIG IPVEQQQTVF 540
  541 EPFRQADGSV SRKYGGTGLG LSISRELAKL LGGEISLVSA PGEGSSFTLT LPRHFTETPV 600
  601 TRPHYRPAPR EAAPLLATRT DLPAPPPRVR SVEDDRDALT GDSRVILFVE DDPAFARILC 660
  661 DLARELDFQC LLAESADEGV TLARQFVPQA IILDMGLPDH SGLSVLDRLK RDVNTRHIPV 720
  721 HCVSVADHAH AALSSGAVGY MFKPVKRQQL TEVLEGLQHH FSARMRRVLL VEDDATQRES 780
  781 LRLLLATRDV DTVEAADASE CLERLSTQTF DCMVMDLNLP DASGFELLEK LSRDDSLSFP 840
  841 PVIVYTGRDL SAEEELRLRR YSKSIIIKGA KSPERLLDEV TLFLHQVVAD LPARQQAMLA 900
  901 TALNRDALLE GRQILVAEDD VRNIYALTSL FEPHGATVHI ARNGVEALKF LEGERGRDID 960
  961 LVLMDVMMPE MDGLTATREI RANPNWRDLP IISLTAKATA QDQAQCIAAG ANDYLAKPLD1020
 1021 VDKLLSLVRV WMPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle