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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94498146, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNDIRTNRE HIQVKHASQR GKVQRNANDF TRGSQLFVHE LQMFGEGLKV PFYIILSIFA  60
   61 LSAVTALMIW YSHKEFYLAF MRVYSALWSY FEFDPEKPVE LHLLNGKIGH TTMQYVSLVP 120
  121 EVRQSWNRLL NVLFSSFMFS VMIGYPASIW FVQHSKKRGN EILQDHHERG ALLVDQTILD 180
  181 TNVRSYNSRQ AFVEWEREDP ANRTAAKWAK MSNRERHQEG VHFPYLLAGL PYPYKTEMAH 240
  241 TMFIGSTGSG KTVQMLTMIE QSKKRGNKAV VFDLTGQYVE RFYNPETDII LNPFDVRCPS 300
  301 WTIFNDCPGY VEMTAAANAL VPSDGGTGEP FWVQAARTLF VEMCEKLRSE GRTTNRDIAR 360
  361 RLMTADLKTI HESLRNTIAS PITSTEAARM AESIRSTFVT NAQALRFLPD AGKRFSITEW 420
  421 LASDVPGSTL FISSTYSDLQ LTRQLLTLWL DIAVQRLLIM PRTRQLRSWF FFDEIHALHR 480
  481 LPAIENGLQT ARGYGGAFVL GLHSFDKLAE TYGEKSANTL AALARTKLIL TTADTTTAET 540
  541 CSAFIGSREV RQMDEGYSYG ISKMRDGSTV TPTTKVEPLV LPDDLMNLPS LSGYVKFAEG 600
  601 FPAARISYPF KDWPVQAPGF LRRQNIRPIE AMYELGRTEQ TANSFGTPPD ANAEGGLTSK 660
  661 PDQLIGVPTD ALDIMGGDDN MPLFEEYERQ QREAPVEQMR GNAEERRTDP ETTLEQQQSD 720
  721 SSRDHANQTD FARDRTSSER AQLLEAQISA AEEATREDGI EM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle